ENCFF400GBK
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | spleen (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR587CPE |
| Description: | Part of ENCODE experiment ENCSR587CPE. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 153.00 | 0.27 | 0.75 | 100.0 | MT-TQ-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 16924.00 | 29.53 | 83.49 | 85.77 | MT-TQ-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 2258.90 | 3.94 | 11.14 | 7.31 | MT-TQ-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 4091.00 | 37.96 | 20.18 | 100.0 | MT-TM-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 5762.00 | 53.47 | 28.43 | 94.72 | MT-TM-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 119.00 | 36.96 | 0.59 | 100.0 | MT-TC-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 25449.00 | 54.53 | 125.55 | 100.0 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 247.00 | 0.53 | 1.22 | 100.0 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 8789.00 | 18.83 | 43.36 | 85.29 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 1690.00 | 3.62 | 8.34 | 100.0 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 471.00 | 1.01 | 2.32 | 100.0 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 5599.00 | 12.00 | 27.62 | 83.97 | MT-TY-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 2124.00 | 84.72 | 10.48 | 100.0 | MT-TD-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 665101.00 | 97.97 | 3281.16 | 100.0 | MT-TK-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 125.00 | 0.02 | 0.62 | 100.0 | MT-TK-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 177.00 | 0.03 | 0.87 | 100.0 | MT-TK-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 5731.00 | 0.84 | 28.27 | 100.0 | MT-TK-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 53.00 | 2.45 | 0.26 | 100.0 | MT-TS2-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 32.00 | 1.48 | 0.16 | 100.0 | MT-TS2-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 154.00 | 7.11 | 0.76 | 68.75 | MT-TS2-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 88.00 | 14.33 | 0.43 | 100.0 | MT-TL2-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 40.00 | 0.15 | 0.20 | 100.0 | MT-TE-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 922.00 | 3.48 | 4.55 | 81.09 | MT-TE-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 56.00 | 0.21 | 0.28 | 88.89 | MT-TE-201 | Mt tRNA | spleen (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 7.00 | 0.03 | 0.03 | 12.96 | MT-TE-201 | Mt tRNA | spleen (Tissue) |