ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 341.00 3.78 1.32 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1499.00 16.60 5.82 93.8 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 758.56 8.40 2.95 43.32 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1077.00 11.93 4.18 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 936.54 10.37 3.64 53.49 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 258.00 2.86 1.00 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 46919.00 96.74 182.19 98.22 MIR146B-201 miRNA transverse colon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 4959.00 49.05 19.26 100.0 SNHG20-201 lncRNA transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 888.00 30.45 3.45 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 181.00 6.21 0.70 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 16.00 6.58 0.06 100.0 LINC01556-201 lncRNA transverse colon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 430.00 43.97 1.67 100.0 ATAD3A-202 protein coding transverse colon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 2067.00 54.83 8.03 70.4 TMC5-202 protein coding transverse colon (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 103.00 83.74 0.40 100.0 ZMYM2-203 protein coding transverse colon (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 149.00 1.61 0.58 100.0 RNVU1-7-201 snRNA transverse colon (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1382.00 40.92 5.37 100.0 SNORD24-201 snoRNA transverse colon (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 289.00 75.26 1.12 100.0 Y_RNA.389-201 misc RNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 690.00 1.65 2.68 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 1764.00 4.22 6.85 87.8 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 36426.00 87.12 141.44 99.56 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 1099.00 2.63 4.27 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 58052.00 98.02 225.41 100.0 SNORD37-201 snoRNA transverse colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 23112.00 79.17 89.74 96.78 SNORD59A-201 snoRNA transverse colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 6.00 1.31 0.02 100.0 SNORA7B-201 snoRNA transverse colon (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 202.00 64.13 0.78 100.0 SNORD14D-201 snoRNA transverse colon (Tissue)