ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 12796.00 5.15 49.69 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 748.00 0.30 2.90 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 8918.83 3.59 34.63 43.84 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 984.00 0.40 3.82 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 671.83 0.27 2.61 48.13 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1651.00 0.66 6.41 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1933.00 0.78 7.51 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 910.85 0.37 3.54 58.05 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1144.00 42.93 4.44 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1069.00 40.11 4.15 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1283.00 5.95 4.98 100.0 Y_RNA.234-201 misc RNA transverse colon (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 182.00 0.08 0.71 100.0 RNA5S9-201 rRNA transverse colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 302.00 4.22 1.17 100.0 RNA5SP141-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 71.00 53.38 0.28 100.0 SNORD114-15-201 snoRNA transverse colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 87.00 33.21 0.34 100.0 ENST00000364722 snoRNA transverse colon (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 12.00 27.27 0.05 100.0 SNORD115-15-201 snoRNA transverse colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 268.00 39.53 1.04 100.0 SNORD113-3-201 snoRNA transverse colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 7189.00 74.48 27.91 100.0 SNORD52-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 253.00 30.59 0.98 65.37 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 134.00 16.20 0.52 37.02 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 16.00 1.18 0.06 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 279.00 20.51 1.08 100.0 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 859.00 63.16 3.34 91.29 SNORD114-3-201 snoRNA transverse colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 39.00 1.67 0.15 100.0 RNA5SP298-201 rRNA pseudogene transverse colon (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 3.00 33.33 0.01 100.0 SNORD115-38-201 snoRNA transverse colon (Tissue)