ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 3122.00 0.33 12.12 93.36 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 118.00 0.01 0.46 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 371.00 0.04 1.44 90.05 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 68053.00 7.26 264.25 34.69 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 205.00 0.02 0.80 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 168.00 0.02 0.65 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 8125.00 87.65 31.55 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 270.00 0.00 1.05 93.43 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 4988.00 29.35 19.37 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 4575.00 26.92 17.76 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1079.00 5.85 4.19 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 233.00 0.64 0.90 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 173.00 0.00 0.67 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 656.00 0.01 2.55 2.5 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 11964.00 31.52 46.46 36.85 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 20500.00 54.00 79.60 76.62 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 748.00 4.94 2.90 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1319.00 0.14 5.12 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 547336.00 58.43 2125.29 88.66 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 2603.00 47.16 10.11 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 66.00 1.37 0.26 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 313.00 0.33 1.22 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 2098.00 3.35 8.15 51.37 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 6962.00 11.10 27.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 729.00 1.16 2.83 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)