ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 168.00 21.32 0.65 100.0 Y_RNA.14-201 misc RNA transverse colon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 70.00 7.55 0.27 100.0 RNU5E-1-201 snRNA transverse colon (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 147.00 1.35 0.57 44.68 RNA5SP370-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 374.00 29.11 1.45 100.0 SNORA31-201 snoRNA transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 30.00 0.28 0.12 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 245.00 2.26 0.95 64.64 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 613.00 5.65 2.38 56.29 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1665.00 15.35 6.47 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 124.00 0.28 0.48 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4111.00 9.16 15.96 69.08 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 3952.00 8.81 15.35 69.69 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 2891.00 6.44 11.23 81.71 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2205.00 4.91 8.56 50.92 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 526.00 1.17 2.04 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 3537.00 7.88 13.73 66.42 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2113.00 4.71 8.20 54.17 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 479.46 1.07 1.86 54.8 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4246.00 9.46 16.49 71.11 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 2381.12 5.31 9.25 51.92 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 2592.38 5.78 10.07 58.89 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 470.39 1.05 1.83 37.1 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2736.00 6.10 10.62 51.71 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 149.00 73.40 0.58 100.0 SNORD114-14-201 snoRNA transverse colon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1247.00 5.62 4.84 100.0 SNORD104-201 snoRNA transverse colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 83.00 0.37 0.32 100.0 SNORD104-201 snoRNA transverse colon (Tissue)