ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 14716.00 86.85 57.14 99.88 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 126.00 0.74 0.49 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 111.00 0.66 0.43 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 677.00 4.00 2.63 100.0 ZFAS1-238 lncRNA transverse colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1352.00 29.66 5.25 100.0 ZFAS1-242 lncRNA transverse colon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 2808.00 61.61 10.90 100.0 ZFAS1-242 lncRNA transverse colon (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1122.00 32.08 4.36 100.0 ENST00000837997 lncRNA transverse colon (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 758.00 21.67 2.94 100.0 ENST00000837997 lncRNA transverse colon (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 10837.00 77.09 42.08 84.03 ENST00000839036 lncRNA transverse colon (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 49.00 7.84 0.19 100.0 ENST00000849527 lncRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 157814.00 77.69 612.79 95.1 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 57.00 0.03 0.22 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 233.00 0.02 0.90 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 4525.00 56.21 17.57 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1927.00 23.94 7.48 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 346.00 20.41 1.34 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 292.00 3.15 1.13 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1453.00 36.87 5.64 88.01 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 258.00 0.02 1.00 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 4.00 11.76 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2593.00 14.06 10.07 86.96 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 489.00 2.65 1.90 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 2881.00 15.63 11.19 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 11331.00 46.75 44.00 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1787.00 0.19 6.94 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)