ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2872.47 4.14 11.15 37.71 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3354.43 4.83 13.03 44.03 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 46322.00 66.76 179.87 87.43 ENST00000797550 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 171563.00 81.68 666.18 92.89 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 211.00 0.10 0.82 100.0 MIR181A1HG-212 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 181.00 10.25 0.70 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 938.00 53.14 3.64 100.0 C19orf48P-218 lncRNA transverse colon (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 14175.00 77.86 55.04 95.8 SNHG18-220 lncRNA transverse colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 205.00 8.36 0.80 100.0 ENST00000817026 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1807.73 6.48 7.02 53.8 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 98.00 0.35 0.38 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 779.76 2.79 3.03 25.19 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 201.96 0.72 0.78 44.48 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 158.00 0.57 0.61 100.0 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3682.00 13.19 14.30 99.33 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 238.88 0.86 0.93 9.31 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 334.00 1.20 1.30 80.87 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1686.63 6.04 6.55 20.99 ENST00000823279 lncRNA transverse colon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 6411.95 22.97 24.90 80.79 ENST00000823801 lncRNA transverse colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 566.00 49.48 2.20 59.45 ENST00000827714 lncRNA transverse colon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 386.00 33.74 1.50 40.55 ENST00000827714 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 5553.00 14.19 21.56 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 234.00 0.60 0.91 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2491.00 6.37 9.67 100.0 GAS5-377 lncRNA transverse colon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 28808.00 73.64 111.86 100.0 GAS5-377 lncRNA transverse colon (Tissue)