ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 14006.00 2.95 54.38 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 433153.00 91.20 1681.92 97.7 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 646.00 0.14 2.51 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 884.00 48.71 3.43 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 83.00 4.57 0.32 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 1262.00 54.87 4.90 100.0 ENST00000773843 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 40.00 0.00 0.16 100.0 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 301022.00 37.50 1168.86 88.42 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 498826.00 62.14 1936.93 98.76 SNHG12-223 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 19501.00 1.60 75.72 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1150891.00 94.34 4468.88 96.95 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 72.00 0.01 0.28 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 155.85 0.01 0.61 53.01 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 241.30 0.02 0.94 54.23 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 222.99 0.02 0.87 33.84 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4655.00 0.38 18.08 78.87 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 303.00 0.02 1.18 100.0 SNHG25-206 lncRNA transverse colon (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 10.00 7.41 0.04 100.0 ENST00000778783 lncRNA transverse colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1367.00 87.68 5.31 91.44 MIR155HG-205 lncRNA transverse colon (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 43.00 79.63 0.17 100.0 ENST00000784740 lncRNA transverse colon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 88.00 0.37 0.34 100.0 ENST00000785178 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 168.00 5.78 0.65 60.87 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1022.00 35.16 3.97 100.0 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 108.00 3.72 0.42 43.03 ENST00000786284 lncRNA transverse colon (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 1427.00 24.65 5.54 84.09 ENST00000788343 lncRNA transverse colon (Tissue)