ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1042.00 2.30 4.05 100.0 SNHG32-227 lncRNA transverse colon (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 287.00 0.63 1.11 100.0 SNHG32-227 lncRNA transverse colon (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 202.00 0.45 0.78 100.0 SNHG32-227 lncRNA transverse colon (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 865.00 81.99 3.36 100.0 B4GALT1-203 nonsense mediated decay transverse colon (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 331.00 3.12 1.29 100.0 ENST00000722183 lncRNA transverse colon (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 5497.00 51.79 21.34 81.16 ENST00000722183 lncRNA transverse colon (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 415.00 3.91 1.61 100.0 ENST00000722183 lncRNA transverse colon (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 30.00 52.63 0.12 100.0 MIR34BHG-202 lncRNA transverse colon (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 3723.00 71.04 14.46 75.79 THBS3-AS1-228 lncRNA transverse colon (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 2193.00 45.83 8.52 100.0 MIR200CHG-202 lncRNA transverse colon (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 859.00 17.95 3.34 100.0 MIR200CHG-202 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 1841.00 34.58 7.15 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 727.00 13.66 2.82 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 71.00 1.33 0.28 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 206.00 3.87 0.80 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 13.00 59.09 0.05 100.0 MEG8-261 lncRNA transverse colon (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 564.00 53.97 2.19 100.0 NR2F2-AS1-327 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 3151.00 12.00 12.24 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 477.00 1.82 1.85 45.34 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 16397.00 62.43 63.67 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 287.00 1.09 1.11 37.57 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 288.00 1.10 1.12 37.65 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 17965.00 66.46 69.76 88.03 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 1134.00 4.19 4.40 54.6 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 136.00 6.87 0.53 100.0 LINC02422-207 lncRNA transverse colon (Tissue)