ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 30101.00 22.33 116.88 75.83 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 7909.00 5.87 30.71 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 38860.00 28.83 150.89 86.78 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 131.00 33.16 0.51 100.0 MT-TD-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 136.00 0.07 0.53 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 3340.00 1.65 12.97 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 190413.00 94.35 739.37 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 387.00 0.19 1.50 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 2311.00 41.05 8.97 88.17 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 55.00 0.98 0.21 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 1005.00 17.85 3.90 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 2220.00 55.51 8.62 100.0 MT-TL2-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 279.00 0.06 1.08 37.05 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 474.00 0.09 1.84 67.52 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 714.00 0.14 2.77 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 461633.00 91.23 1792.51 94.79 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 412.00 0.08 1.60 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 41.00 0.01 0.16 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 3215.00 0.64 12.48 97.87 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 1779.00 46.63 6.91 100.0 MIR196A1-201 miRNA transverse colon (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 7.00 0.14 0.03 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3186.00 61.85 12.37 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 52.00 71.23 0.20 100.0 MIR454-201 miRNA transverse colon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 278.00 61.78 1.08 100.0 MIR501-201 miRNA transverse colon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 2313.00 88.79 8.98 100.0 MIR769-201 miRNA transverse colon (Tissue)