ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 4002.00 86.27 15.54 100.0 MIR196A2-201 miRNA transverse colon (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 175.00 78.83 0.68 100.0 MIR577-201 miRNA transverse colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 91.00 65.00 0.35 86.67 MIR654-201 miRNA transverse colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 95.00 94.06 0.37 97.94 MIR204-201 miRNA transverse colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1558.00 92.24 6.05 100.0 MIR152-201 miRNA transverse colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 31.00 54.39 0.12 100.0 MIR138-1-201 miRNA transverse colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1596.00 88.67 6.20 100.0 MIR30C1-201 miRNA transverse colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 263.00 89.15 1.02 100.0 MIR660-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 280.00 7.49 1.09 100.0 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2730.00 72.99 10.60 87.67 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 26.00 33.33 0.10 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 37.00 47.44 0.14 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 4522.67 11.91 17.56 17.25 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 25186.71 66.33 97.80 70.04 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 5043.00 86.74 19.58 90.96 MIR100-201 miRNA transverse colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 253.00 94.76 0.98 100.0 MIR301A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 688.00 13.96 2.67 57.48 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 4205.00 85.31 16.33 93.88 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 73144.00 98.59 284.02 99.15 MIRLET7F2-201 miRNA transverse colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 280.00 73.68 1.09 100.0 MIR652-201 miRNA transverse colon (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 2.00 50.00 0.01 100.0 MIR653-201 miRNA transverse colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 4795.00 77.59 18.62 100.0 MIR140-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 60.00 7.66 0.23 100.0 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 296.00 37.80 1.15 63.93 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 35580.00 26.27 138.16 93.19 SNORD83A-201 snoRNA transverse colon (Tissue)