ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 17395.00 96.44 67.54 97.97 MIR186-201 miRNA transverse colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 16186.00 88.00 62.85 100.0 MIR200B-201 miRNA transverse colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 86.00 69.35 0.33 100.0 MIR218-1-201 miRNA transverse colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 21179.00 92.07 82.24 95.86 MIR181B2-201 miRNA transverse colon (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 2.00 50.00 0.01 100.0 MIR495-201 miRNA transverse colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1823200.00 89.26 7079.44 89.71 MIR10B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 309.67 32.19 1.20 55.8 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 464.31 48.27 1.80 52.11 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 31.00 3.22 0.12 100.0 MIR130B-201 miRNA transverse colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 5716.00 34.91 22.20 100.0 MIR199A1-201 miRNA transverse colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 11.00 61.11 0.04 100.0 MIR487B-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 2345.95 70.75 9.11 73.75 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 638.69 19.26 2.48 24.36 MIR93-201 miRNA transverse colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 1649.00 82.49 6.40 89.96 MIR532-201 miRNA transverse colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 32.00 80.00 0.12 100.0 MIR15B-201 miRNA transverse colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 524.00 71.58 2.03 100.0 MIR150-201 miRNA transverse colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 47.00 55.29 0.18 100.0 MIR542-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 678.00 76.61 2.63 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 43.00 4.86 0.17 100.0 MIR500A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 53728.00 83.07 208.62 96.11 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3005.00 4.65 11.67 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 136.00 0.21 0.53 100.0 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 5024.00 7.77 19.51 69.8 MIR30A-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 107894.00 91.28 418.95 94.47 MIR27B-201 miRNA transverse colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 957.00 0.81 3.72 100.0 MIR27B-201 miRNA transverse colon (Tissue)