ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 126.00 0.36 0.57 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 2079.00 83.56 9.41 86.34 MIR155HG-205 lncRNA stomach (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 79.00 77.45 0.36 100.0 ENST00000784740 lncRNA stomach (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 42.00 0.78 0.19 100.0 ENST00000785178 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 41.00 2.02 0.19 41.84 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 503.00 24.74 2.28 100.0 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 57.00 2.80 0.26 61.96 ENST00000786284 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1208.97 4.77 5.47 58.43 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 958.30 3.78 4.34 46.32 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 10140.00 40.01 45.87 58.81 ENST00000797550 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 81807.00 83.73 370.08 91.39 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 151.00 0.15 0.68 100.0 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 88.00 71.54 0.40 100.0 C19orf48P-218 lncRNA stomach (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2212.00 60.42 10.01 92.44 SNHG18-220 lncRNA stomach (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 128.00 12.16 0.58 100.0 ENST00000817026 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 19.00 0.27 0.09 100.0 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 335.65 4.75 1.52 30.99 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 125.20 1.77 0.57 62.91 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 737.15 10.44 3.33 59.74 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 122.15 1.73 0.55 12.94 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 191.00 2.70 0.86 80.93 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1285.25 18.19 5.81 39.33 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2667.55 37.77 12.07 80.88 ENST00000823801 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1748.00 51.87 7.91 60.97 ENST00000827714 lncRNA stomach (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1119.00 33.20 5.06 39.03 ENST00000827714 lncRNA stomach (Tissue)