ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 11960.00 49.87 54.11 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 1534.00 6.40 6.94 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 26.00 0.01 0.12 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 14705.00 4.24 66.52 67.13 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 16.00 0.00 0.07 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 307628.00 88.70 1391.67 97.24 LINC02806-241 lncRNA stomach (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 393.00 82.74 1.78 100.0 EHBP1-AS1-210 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 499.00 5.61 2.26 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 69.00 0.78 0.31 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 2440.00 27.44 11.04 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 193.00 0.64 0.87 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 258.00 0.85 1.17 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 10192.00 33.67 46.11 41.63 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 580.00 1.92 2.62 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 48.00 7.92 0.22 100.0 ENST00000772672 lncRNA stomach (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 896.00 27.37 4.05 100.0 ENST00000773843 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 48449.00 35.70 219.18 87.24 SNHG12-223 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 86395.00 63.66 390.84 98.91 SNHG12-223 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 20206.00 58.13 91.41 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 212.00 0.61 0.96 81.23 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 226.00 0.65 1.02 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 223.59 0.64 1.01 37.9 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 237.02 0.68 1.07 39.77 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 404.78 1.16 1.83 44.83 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5274.00 15.17 23.86 77.82 SNHG25-206 lncRNA stomach (Tissue)