ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2001.00 35.59 9.05 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 122.00 2.17 0.55 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 725.00 12.90 3.28 100.0 SNHG16-266 lncRNA stomach (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 3.00 30.00 0.01 100.0 MEG8-261 lncRNA stomach (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 87.00 24.51 0.39 100.0 NR2F2-AS1-327 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 570.00 1.83 2.58 51.87 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 22759.00 73.03 102.96 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 316.00 1.01 1.43 35.67 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 213.00 0.68 0.96 27.2 ENST00000747675 lncRNA stomach (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 2314.00 7.42 10.47 100.0 ENST00000747675 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 17645.00 72.71 79.82 87.98 SNHG26-250 lncRNA stomach (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 1446.00 5.96 6.54 100.0 SNHG26-250 lncRNA stomach (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 67.00 14.99 0.30 100.0 LINC02422-207 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 103.00 1.83 0.47 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 3888.00 69.05 17.59 100.0 ENST00000753088 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 3623.89 5.52 16.39 26.88 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 903.00 1.38 4.09 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 606.00 0.92 2.74 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 103.00 0.16 0.47 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 31009.35 47.25 140.28 76.72 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 7279.22 11.09 32.93 39.61 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 641.54 0.98 2.90 32.04 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 8956.64 13.65 40.52 72.06 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1883.60 2.87 8.52 73.98 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 44.00 21.57 0.20 100.0 ENST00000756452 lncRNA stomach (Tissue)