ENCFF338AVU

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR646HQQ
Description: Part of ENCODE experiment ENCSR646HQQ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 59.00 68.60 0.18 73.75 MIR381-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 2358.00 80.51 7.02 91.04 MIR103A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 3.00 42.86 0.01 100.0 MIR369-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 4.00 57.14 0.01 100.0 MIR369-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 83.00 52.87 0.25 100.0 MIR425-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 27.00 17.20 0.08 100.0 MIR425-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 21.00 44.68 0.06 100.0 MIR210-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 13135.00 95.09 39.11 96.4 MIR378A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 872.00 70.95 2.60 100.0 MIR361-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 113.00 3.90 0.34 61.41 MIR101-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 2656.00 91.55 7.91 97.4 MIR101-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 3.00 75.00 0.01 100.0 MIR323A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 235476.00 99.10 701.14 99.57 MIR26A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 39.00 66.10 0.12 100.0 MIR129-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 973.00 68.71 2.90 100.0 MIR342-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 66.00 0.36 0.20 100.0 MIR148A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 17023.00 93.10 50.69 94.13 MIR148A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 152.00 95.60 0.45 100.0 MIR410-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 4.00 0.43 0.01 100.0 MIR409-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 849.00 90.80 2.53 100.0 MIR409-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 482.00 98.57 1.44 100.0 MIR411-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 6855.00 93.81 20.41 95.62 MIR26B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 143.00 63.56 0.43 67.77 MIR148B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 7509.00 95.43 22.36 97.85 MIRLET7G-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 6441.00 35.52 19.18 87.28 MIR30D-201 miRNA gastroesophageal sphincter (Tissue)