ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1554.00 4.52 9.98 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 298.00 0.87 1.91 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 73.00 43.45 0.47 100.0 SNORD114-9-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 5180.00 60.50 33.25 100.0 Y_RNA.234-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 1045.00 2.32 6.71 100.0 RNA5SP141-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 14.00 56.00 0.09 100.0 SNORD114-15-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 5469.00 79.38 35.11 100.0 ENST00000364722 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 20.00 0.20 0.13 100.0 SNORD52-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 4.00 0.41 0.03 80.0 SNORD117-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1.00 0.10 0.01 20.0 SNORD117-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1.00 12.50 0.01 100.0 SNORD114-3-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 81.00 0.55 0.52 100.0 RNA5SP298-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1.00 11.11 0.01 100.0 SNORD113-9-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 2051.00 59.97 13.17 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 317.00 9.27 2.04 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 44.00 1.29 0.28 100.0 SNORD38A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1.00 0.96 0.01 100.0 SNORD114-20-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 1.00 0.19 0.01 100.0 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 51.00 9.46 0.33 80.95 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2.00 0.37 0.01 66.67 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 6.00 1.11 0.04 33.33 7SK.1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 1.00 3.85 0.01 100.0 SNORD115-44-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 2.00 0.12 0.01 100.0 RNA5SP77-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 158.00 61.72 1.01 100.0 SNORD114-22-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1.00 0.39 0.01 100.0 SNORD114-22-201 snoRNA trophoblast cell (In vitro differentiated cells)