ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 109.00 3.04 0.70 100.0 SNORD104-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 3.00 0.08 0.02 100.0 SNORD104-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1979.00 19.57 12.70 67.54 RNA5SP358-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 707.00 1.34 4.54 89.72 RNA5SP145-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1.00 2.56 0.01 100.0 Y_RNA.105-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 2.00 0.14 0.01 100.0 RNY4P9-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 45.00 8.49 0.29 100.0 RNU5B-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 4.00 0.75 0.03 100.0 RNU5B-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 2.00 15.38 0.01 100.0 SNORD115-18-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 22.00 1.04 0.14 88.0 RNY4P27-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 359.00 12.50 2.30 100.0 Y_RNA.136-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1.00 1.00 0.01 100.0 SNORD114-25-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 2.00 33.33 0.01 100.0 SNORD113-7-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 189.00 19.61 1.21 100.0 Y_RNA.181-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1113.00 5.32 7.15 100.0 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 4775.33 22.85 30.66 73.15 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1036.21 4.96 6.65 25.34 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 5.00 0.02 0.03 100.0 RNY1-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1.60 0.00 0.01 17.77 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 66.00 0.19 0.42 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 6.02 0.02 0.04 66.83 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 41.00 0.12 0.26 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 268.00 0.78 1.72 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1554.00 4.52 9.98 100.0 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1411.97 4.11 9.06 45.1 RNA5SP202-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)