ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 539.00 13.93 3.46 98.54 MIR126-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 4055.00 52.08 26.03 100.0 MIR374A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 14208.00 81.65 91.21 100.0 MIR31-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 12051.00 16.13 77.36 79.52 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 30.25 0.04 0.19 54.01 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 63.00 0.08 0.40 37.28 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 47.01 0.06 0.30 57.33 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 150.00 0.20 0.96 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 4.00 0.01 0.03 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 260.00 0.35 1.67 79.51 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 6.00 0.01 0.04 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 6.00 0.01 0.04 5.36 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 505.00 0.68 3.24 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 798.00 8.11 5.12 100.0 Y_RNA.14-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 437.00 37.58 2.81 100.0 RNU5E-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 47.00 11.81 0.30 100.0 SNORA31-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 66.00 0.12 0.42 49.62 RNA5SP389-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 576.00 1.09 3.70 74.23 RNA5SP389-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 61.00 2.56 0.39 100.0 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 563.12 23.61 3.62 35.57 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1.00 0.04 0.01 33.33 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 10.00 0.42 0.06 11.24 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1116.44 46.81 7.17 71.16 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 7.00 0.29 0.04 77.78 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2.00 0.08 0.01 66.67 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)