ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 553.00 0.99 3.55 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 63.00 0.11 0.40 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 1652.00 2.95 10.61 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 4408.00 7.87 28.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 20.00 0.04 0.13 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 9850.00 17.59 63.23 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 83.00 0.08 0.53 68.6 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 211.00 0.20 1.35 64.33 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 6692.00 6.32 42.96 98.83 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 2413.00 11.49 15.49 92.45 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3.00 2.73 0.02 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 35.00 12.82 0.22 36.84 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 99.00 60.37 0.64 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 27159.00 37.47 174.35 54.51 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1535.00 2.12 9.85 95.05 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 80.00 0.11 0.51 4.95 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1802.24 42.62 11.57 93.0 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 99.00 2.34 0.64 19.37 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 129.73 3.07 0.83 6.86 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 8220.00 61.95 52.77 91.21 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 2.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 4035.00 18.27 25.90 92.55 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 1281.00 1.46 8.22 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1419.00 1.13 9.11 86.1 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA trophoblast cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 151.00 1.06 0.97 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA trophoblast cell (In vitro differentiated cells)