ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 13272.00 0.52 85.20 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 727434.08 28.36 4669.93 30.71 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 36089.00 1.41 231.68 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 712.00 0.03 4.57 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 23637.00 0.92 151.74 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 41752.00 1.63 268.04 100.0 MIR17HG-214 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 48425.00 66.29 310.88 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 3044.00 4.17 19.54 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 67.00 0.09 0.43 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 9.00 0.01 0.06 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 13670.00 18.71 87.76 100.0 SNHG32-223 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 252.00 2.45 1.62 98.82 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 6475.00 62.96 41.57 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 15.00 0.15 0.10 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 558.00 5.43 3.58 100.0 SNHG32-227 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 96.00 55.17 0.62 100.0 B4GALT1-203 nonsense mediated decay trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 340.00 2.30 2.18 100.0 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 6062.00 41.00 38.92 87.79 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1786.00 12.08 11.47 100.0 ENST00000722183 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 6917.00 93.93 44.41 100.0 MIR34BHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 27629.00 75.24 177.37 80.36 THBS3-AS1-228 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 5488.00 22.90 35.23 100.0 MIR200CHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 9112.00 38.03 58.50 100.0 MIR200CHG-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 878.00 37.39 5.64 100.0 SNHG16-266 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 420.00 17.89 2.70 100.0 SNHG16-266 lncRNA trophoblast cell (In vitro differentiated cells)