ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 59.00 0.05 0.38 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1316.00 1.15 8.45 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 7753.00 6.76 49.77 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 4.00 0.00 0.03 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 1.00 0.00 0.01 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 65.00 0.06 0.42 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 560.00 0.49 3.60 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 4349.00 3.79 27.92 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 887.00 0.77 5.69 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 1142.00 1.00 7.33 97.11 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 630.00 0.55 4.04 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 16.00 0.01 0.10 88.89 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 3193.00 2.79 20.50 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 816.00 0.71 5.24 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 162.00 0.14 1.04 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1005.00 0.88 6.45 93.06 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 14.69 0.01 0.09 66.79 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 402.00 0.35 2.58 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1108.00 0.97 7.11 63.53 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 4.00 0.00 0.03 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 89.00 0.08 0.57 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1.00 0.00 0.01 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 19.00 0.34 0.12 100.0 SNHG14-315 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 8.00 0.14 0.05 100.0 SNHG14-315 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 12.00 0.21 0.08 85.71 SNHG14-315 lncRNA trophoblast cell (In vitro differentiated cells)