ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 53.00 0.00 0.22 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 2668.00 61.39 11.03 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2.00 1.67 0.01 20.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 8.00 6.67 0.03 80.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 95.00 4.48 0.39 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 1.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 27530.00 97.83 113.85 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 69.00 44.81 0.29 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1541.00 86.82 6.37 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 96.00 1.04 0.40 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 6.00 0.07 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1723.00 18.69 7.13 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 57.00 0.62 0.24 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 33.00 0.36 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 23.00 0.25 0.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 539.00 0.03 2.23 71.96 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 733.00 0.05 3.03 60.58 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 877.00 0.06 3.63 93.4 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 46102.00 48.77 190.65 77.89 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3633.00 96.80 15.02 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 6820.00 51.07 28.20 60.9 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 620.00 97.48 2.56 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 56.00 0.06 0.23 93.33 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 4.00 0.00 0.02 6.67 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 83746.00 89.25 346.32 95.85 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA vagina (Tissue)