ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 546617.00 74.67 2260.45 90.2 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 7501.00 44.65 31.02 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 3.00 0.18 0.01 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 57.00 0.62 0.24 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 226.00 0.63 0.93 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 31.00 0.09 0.13 37.35 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 10.00 0.03 0.04 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 123.00 0.34 0.51 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 7.00 0.02 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 129.00 0.36 0.53 90.21 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 97.00 0.40 0.40 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 11047.00 45.55 45.68 49.59 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 53.00 0.22 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 55352.00 88.77 228.90 93.78 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 37.00 0.06 0.15 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 30.00 0.05 0.12 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 58.00 0.09 0.24 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 21.00 0.03 0.09 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 30.00 0.12 0.12 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 25927.00 73.12 107.22 82.76 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 10.00 0.04 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 434.00 12.32 1.79 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 2143.00 60.83 8.86 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 52.00 1.48 0.22 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA vagina (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 160.00 4.54 0.66 85.56 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA vagina (Tissue)