ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 69.00 1.14 0.29 100.0 ENST00000722183 lncRNA vagina (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 8.00 19.51 0.03 100.0 MIR34BHG-202 lncRNA vagina (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 9275.00 82.42 38.36 86.55 THBS3-AS1-228 lncRNA vagina (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 123.00 19.97 0.51 100.0 MIR200CHG-202 lncRNA vagina (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 271.00 43.99 1.12 100.0 MIR200CHG-202 lncRNA vagina (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 750.00 30.67 3.10 100.0 SNHG16-266 lncRNA vagina (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 131.00 5.36 0.54 100.0 SNHG16-266 lncRNA vagina (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 278.00 11.37 1.15 100.0 SNHG16-266 lncRNA vagina (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 5.00 18.52 0.02 100.0 MEG8-261 lncRNA vagina (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 38.00 43.68 0.16 100.0 NR2F2-AS1-327 lncRNA vagina (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 68.00 0.79 0.28 43.31 ENST00000747675 lncRNA vagina (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 6989.00 80.74 28.90 100.0 ENST00000747675 lncRNA vagina (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 57.00 0.66 0.24 45.6 ENST00000747675 lncRNA vagina (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 32.00 0.37 0.13 32.0 ENST00000747675 lncRNA vagina (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 357.00 4.12 1.48 100.0 ENST00000747675 lncRNA vagina (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 22432.00 41.20 92.76 91.68 SNHG26-250 lncRNA vagina (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 25920.00 47.61 107.19 100.0 SNHG26-250 lncRNA vagina (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 31.00 25.83 0.13 100.0 LINC02422-207 lncRNA vagina (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 91.00 5.85 0.38 100.0 ENST00000753088 lncRNA vagina (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 417.00 26.82 1.72 100.0 ENST00000753088 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1372.91 3.42 5.68 23.3 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 823.00 2.05 3.40 100.0 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 147.00 0.37 0.61 100.0 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 907.00 2.26 3.75 100.0 ENST00000756336 lncRNA vagina (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 9030.11 22.48 37.34 31.53 ENST00000756336 lncRNA vagina (Tissue)