ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 2.00 4.76 0.02 100.0 HCN2-201 protein coding OCI-LY7 (Cell line)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 508.00 31.77 5.26 100.0 ATP5MC3-201 protein coding OCI-LY7 (Cell line)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 32.00 54.24 0.33 100.0 CDC25A-201 protein coding OCI-LY7 (Cell line)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 25.00 55.56 0.26 100.0 BLOC1S4-201 protein coding OCI-LY7 (Cell line)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 97.00 7.59 1.01 100.0 ATAD5-201 protein coding OCI-LY7 (Cell line)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 37.00 22.02 0.38 100.0 SLITRK5-201 protein coding OCI-LY7 (Cell line)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 27.00 51.92 0.28 100.0 HASPIN-201 protein coding OCI-LY7 (Cell line)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 28.00 32.56 0.29 100.0 PRR14L-201 protein coding OCI-LY7 (Cell line)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 544.00 97.49 5.64 100.0 ATG101-201 protein coding OCI-LY7 (Cell line)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 1.00 2.94 0.01 100.0 PRICKLE1-201 protein coding OCI-LY7 (Cell line)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 15.00 1.49 0.16 93.75 MIRLET7BHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 874.00 87.05 9.06 97.87 MIRLET7BHG-201 lncRNA OCI-LY7 (Cell line)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1058.00 89.28 10.96 100.0 MIR30E-201 miRNA OCI-LY7 (Cell line)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 99.00 8.35 1.03 100.0 MIR30E-201 miRNA OCI-LY7 (Cell line)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 4.00 80.00 0.04 100.0 MIR29A-201 miRNA OCI-LY7 (Cell line)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 3.00 75.00 0.03 100.0 MIR345-201 miRNA OCI-LY7 (Cell line)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 5376.00 97.64 55.70 100.0 MIR16-2-201 miRNA OCI-LY7 (Cell line)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1.00 100.00 0.01 100.0 MIR340-201 miRNA OCI-LY7 (Cell line)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 56.00 45.16 0.58 100.0 MIR107-201 miRNA OCI-LY7 (Cell line)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 253.00 69.13 2.62 85.47 MIR103A2-201 miRNA OCI-LY7 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 56.00 38.89 0.58 100.0 MIR425-201 miRNA OCI-LY7 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 27.00 18.75 0.28 100.0 MIR425-201 miRNA OCI-LY7 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 107.00 38.49 1.11 100.0 MIR210-201 miRNA OCI-LY7 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 1215.00 94.63 12.59 97.51 MIR378A-201 miRNA OCI-LY7 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 4.00 9.76 0.04 100.0 MIR361-201 miRNA OCI-LY7 (Cell line)