ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 6.00 6.67 0.06 100.0 MIR106B-201 miRNA OCI-LY7 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 44195.00 74.58 457.91 98.06 SNORD83A-201 snoRNA OCI-LY7 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 11005.00 18.57 114.02 93.74 SNORD83A-201 snoRNA OCI-LY7 (Cell line)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 91.00 54.49 0.94 100.0 SNORD41-201 snoRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 99.00 1.62 1.03 55.93 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 47.00 0.77 0.49 14.2 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 94.00 1.53 0.97 100.0 MT-TF-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 485.00 4.89 5.03 100.0 MT-TV-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 72.00 0.15 0.75 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 4.00 0.01 0.04 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 96.00 0.19 0.99 88.89 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 15.00 0.03 0.16 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 64.00 0.13 0.66 82.05 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 9.00 0.02 0.09 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 7.00 0.01 0.07 100.0 MT-RNR2-201 Mt rRNA OCI-LY7 (Cell line)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 3521.00 39.57 36.48 100.0 MT-TI-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 1247.00 14.01 12.92 91.15 MT-TI-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 1922.95 4.18 19.92 52.24 MT-TQ-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 5377.00 11.68 55.71 100.0 MT-TQ-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 862.00 1.87 8.93 79.96 MT-TQ-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1944.87 4.22 20.15 64.17 MT-TQ-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 486.00 1.74 5.04 100.0 MT-TM-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 18761.00 67.05 194.38 91.76 MT-TM-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 182.00 6.85 1.89 100.0 MT-TC-201 Mt tRNA OCI-LY7 (Cell line)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 2642.00 17.73 27.37 100.0 MT-TY-201 Mt tRNA OCI-LY7 (Cell line)