ENCFF299ETH
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | OCI-LY7 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR740DKM |
| Description: | Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 2642.00 | 17.73 | 27.37 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 1447.00 | 9.71 | 14.99 | 66.16 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 1501.00 | 10.07 | 15.55 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 2273.00 | 15.26 | 23.55 | 70.13 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 458.00 | 3.07 | 4.75 | 100.0 | MT-TY-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 149.00 | 11.71 | 1.54 | 100.0 | MT-TD-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 8506.00 | 37.26 | 88.13 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 53.00 | 0.23 | 0.55 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 8.00 | 0.04 | 0.08 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 8396.00 | 36.78 | 86.99 | 100.0 | MT-TK-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 338.00 | 3.16 | 3.50 | 100.0 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 853.00 | 7.97 | 8.84 | 90.26 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 775.00 | 7.24 | 8.03 | 100.0 | MT-TS2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 1083.00 | 10.35 | 11.22 | 100.0 | MT-TL2-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 2011.00 | 1.11 | 20.84 | 71.41 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 2545.00 | 1.40 | 26.37 | 72.96 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 943.00 | 0.52 | 9.77 | 58.57 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_24_69_+ | 24–69 | 79.00 | 0.04 | 0.82 | 100.0 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_1_69_+ | 1–69 | 121689.00 | 66.99 | 1260.82 | 91.08 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_1_57_+ | 1–57 | 751.00 | 0.41 | 7.78 | 100.0 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 3784.00 | 2.08 | 39.21 | 100.0 | MT-TE-201 | Mt tRNA | OCI-LY7 (Cell line) |
| ENST00000389680.2 | ENST00000389680.2_316_354_+ | 316–354 | 353.00 | 1.58 | 3.66 | 100.0 | MT-RNR1-201 | Mt rRNA | OCI-LY7 (Cell line) |
| ENST00000390180.1 | ENST00000390180.1_64_86_+ | 64–86 | 19.00 | 95.00 | 0.20 | 100.0 | MIR454-201 | miRNA | OCI-LY7 (Cell line) |
| ENST00000390204.1 | ENST00000390204.1_51_72_+ | 51–72 | 10.00 | 66.67 | 0.10 | 100.0 | MIR501-201 | miRNA | OCI-LY7 (Cell line) |
| ENST00000390225.1 | ENST00000390225.1_30_51_+ | 30–51 | 187.00 | 96.39 | 1.94 | 100.0 | MIR769-201 | miRNA | OCI-LY7 (Cell line) |