ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 119126.00 93.95 1234.27 99.23 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 158.00 0.12 1.64 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 903.00 0.71 9.36 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 722.00 4.83 7.48 100.0 ZFAS1-242 lncRNA OCI-LY7 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 12972.00 86.72 134.40 100.0 ZFAS1-242 lncRNA OCI-LY7 (Cell line)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 32.00 28.07 0.33 100.0 ENST00000837997 lncRNA OCI-LY7 (Cell line)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 32.00 28.07 0.33 100.0 ENST00000837997 lncRNA OCI-LY7 (Cell line)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 223.00 72.40 2.31 79.64 ENST00000839036 lncRNA OCI-LY7 (Cell line)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 15.00 7.94 0.16 100.0 ENST00000849527 lncRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 252.00 50.60 2.61 90.32 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 59.00 11.85 0.61 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 760.00 9.86 7.87 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 252.00 73.26 2.61 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 6.00 1.74 0.06 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 92.00 22.17 0.95 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 3.00 1.01 0.03 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 380.00 63.65 3.94 96.45 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 472.00 6.12 4.89 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 16.00 0.52 0.17 88.89 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 26.00 0.85 0.27 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 14.00 0.46 0.15 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 321.00 45.53 3.33 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 16986.00 34.91 175.99 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 447.00 0.92 4.63 91.6 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 5.00 0.01 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)