ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1772.48 23.67 18.36 52.97 ENST00000797550 lncRNA OCI-LY7 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 901.93 12.05 9.34 26.96 ENST00000797550 lncRNA OCI-LY7 (Cell line)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1423.00 19.00 14.74 87.79 ENST00000797550 lncRNA OCI-LY7 (Cell line)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 14185.00 89.19 146.97 97.53 MIR181A1HG-212 lncRNA OCI-LY7 (Cell line)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 55.00 0.35 0.57 100.0 MIR181A1HG-212 lncRNA OCI-LY7 (Cell line)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 1232.00 42.35 12.76 100.0 C19orf48P-218 lncRNA OCI-LY7 (Cell line)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 983.00 33.79 10.18 100.0 C19orf48P-218 lncRNA OCI-LY7 (Cell line)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1.00 6.67 0.01 100.0 SNHG18-220 lncRNA OCI-LY7 (Cell line)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 58.00 17.90 0.60 100.0 ENST00000817026 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 205.00 0.86 2.12 100.0 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 1583.71 6.68 16.41 54.5 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1640.98 6.92 17.00 54.61 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 188.00 0.79 1.95 100.0 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3660.00 15.44 37.92 98.63 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1265.80 5.34 13.12 29.67 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1637.52 6.91 16.97 38.02 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 395.00 1.67 4.09 86.24 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 782.69 3.30 8.11 37.92 ENST00000823279 lncRNA OCI-LY7 (Cell line)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1561.93 6.59 16.18 75.49 ENST00000823801 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 12649.00 17.77 131.06 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 138.00 0.19 1.43 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 406.00 0.57 4.21 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 55527.00 78.00 575.32 100.0 GAS5-377 lncRNA OCI-LY7 (Cell line)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 1282.00 25.98 13.28 100.0 TAF12-DT-204 lncRNA OCI-LY7 (Cell line)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 437.00 0.34 4.53 100.0 ZFAS1-238 lncRNA OCI-LY7 (Cell line)