ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 3.00 0.10 0.03 100.0 ENST00000771298 lncRNA OCI-LY7 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 884.00 29.53 9.16 79.0 ENST00000771298 lncRNA OCI-LY7 (Cell line)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 9.00 0.30 0.09 100.0 ENST00000771298 lncRNA OCI-LY7 (Cell line)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1198.00 48.21 12.41 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 2.00 0.08 0.02 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 41.00 1.65 0.42 100.0 ENST00000772672 lncRNA OCI-LY7 (Cell line)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 42.00 22.34 0.44 100.0 ENST00000773843 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 149.00 0.05 1.54 100.0 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 66623.00 22.33 690.28 79.68 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 229527.00 76.94 2378.14 98.21 SNHG12-223 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 1274.00 0.13 13.20 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 876527.00 91.47 9081.73 92.65 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 72.00 0.01 0.75 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 143.47 0.01 1.49 52.94 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 247.29 0.03 2.56 61.67 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 196.18 0.02 2.03 32.81 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2936.00 0.31 30.42 97.41 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 125.00 0.01 1.30 100.0 SNHG25-206 lncRNA OCI-LY7 (Cell line)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1.00 14.29 0.01 100.0 ENST00000778783 lncRNA OCI-LY7 (Cell line)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 120.00 93.75 1.24 98.36 MIR155HG-205 lncRNA OCI-LY7 (Cell line)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 2211.00 54.90 22.91 100.0 ENST00000785178 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 55.00 6.60 0.57 38.19 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 202.00 24.25 2.09 100.0 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 89.00 10.68 0.92 70.08 ENST00000786284 lncRNA OCI-LY7 (Cell line)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 33240.00 82.17 344.40 92.16 ENST00000788343 lncRNA OCI-LY7 (Cell line)