ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 5741.00 5.28 59.48 86.43 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 2328.00 2.14 24.12 73.93 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 3220.00 2.96 33.36 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 481.00 0.44 4.98 62.06 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 94.00 0.09 0.97 14.05 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 152.00 0.14 1.57 100.0 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 442.47 0.41 4.58 53.31 RNA5S12-201 rRNA OCI-LY7 (Cell line)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 223.00 4.15 2.31 100.0 Y_RNA.14-201 misc RNA OCI-LY7 (Cell line)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 127.00 4.03 1.32 100.0 RNU5E-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 901.00 1.46 9.34 13.57 RNA5SP370-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 1034.00 52.86 10.71 100.0 SNORA31-201 snoRNA OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 1720.00 2.78 17.82 87.53 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 5249.00 8.48 54.39 100.0 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 4642.00 7.50 48.10 100.0 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 2197.00 3.55 22.76 72.8 RNA5SP389-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1614.00 3.73 16.72 71.99 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 751.00 1.73 7.78 40.22 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 719.20 1.66 7.45 41.43 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 761.00 1.76 7.88 56.66 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 137.00 0.32 1.42 100.0 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1866.92 4.31 19.34 66.82 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 957.38 2.21 9.92 40.67 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 963.00 2.22 9.98 53.68 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 873.00 2.02 9.05 100.0 RNU5A-1-201 snRNA OCI-LY7 (Cell line)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1916.00 4.42 19.85 80.44 RNU5A-1-201 snRNA OCI-LY7 (Cell line)