ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1176.00 0.39 12.18 100.0 SNHG32-223 lncRNA OCI-LY7 (Cell line)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 291.00 0.10 3.02 100.0 SNHG32-223 lncRNA OCI-LY7 (Cell line)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3001.00 0.99 31.09 89.45 SNHG32-223 lncRNA OCI-LY7 (Cell line)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 295900.00 97.41 3065.83 100.0 SNHG32-223 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 36169.00 93.58 374.75 98.37 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 317.00 0.82 3.28 100.0 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 193.00 0.50 2.00 100.0 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 144.00 0.37 1.49 100.0 SNHG32-227 lncRNA OCI-LY7 (Cell line)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 67.00 60.91 0.69 100.0 B4GALT1-203 nonsense mediated decay OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 22.00 0.97 0.23 100.0 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 114.00 5.00 1.18 85.71 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 280.00 12.29 2.90 100.0 ENST00000722183 lncRNA OCI-LY7 (Cell line)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 33.00 73.33 0.34 97.06 THBS3-AS1-228 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 340.00 12.52 3.52 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 260.00 9.57 2.69 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 175.00 6.44 1.81 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 64.00 2.36 0.66 100.0 SNHG16-266 lncRNA OCI-LY7 (Cell line)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 210.00 55.56 2.18 100.0 NR2F2-AS1-327 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 84.00 6.75 0.87 39.07 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 288.00 23.15 2.98 100.0 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 74.00 5.95 0.77 46.84 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 57.00 4.58 0.59 40.43 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 194.00 15.59 2.01 100.0 ENST00000747675 lncRNA OCI-LY7 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 7278.00 55.10 75.41 94.14 SNHG26-250 lncRNA OCI-LY7 (Cell line)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 99.00 0.75 1.03 11.65 SNHG26-250 lncRNA OCI-LY7 (Cell line)