ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 34.00 70.83 0.35 100.0 MIR320B2-201 miRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 248.00 2.54 2.57 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 643.00 6.59 6.66 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 7663.00 78.59 79.40 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 11.00 0.11 0.11 100.0 SNORD100-201 snoRNA OCI-LY7 (Cell line)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 132.00 21.32 1.37 100.0 SNORD111B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 104.00 10.73 1.08 100.0 RNU2-36P-201 snRNA OCI-LY7 (Cell line)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 11.00 1.14 0.11 100.0 RNU2-36P-201 snRNA OCI-LY7 (Cell line)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 108921.00 93.94 1128.54 97.19 SNORD19C-201 snoRNA OCI-LY7 (Cell line)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 349.00 0.30 3.62 100.0 SNORD19C-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 76791.00 87.72 795.63 95.43 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2920.00 3.34 30.25 100.0 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 415.00 0.47 4.30 100.0 SNORD12B-201 snoRNA OCI-LY7 (Cell line)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 24.00 7.32 0.25 100.0 Y_RNA.609-201 misc RNA OCI-LY7 (Cell line)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 7.00 6.09 0.07 100.0 Y_RNA.612-201 misc RNA OCI-LY7 (Cell line)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 17.00 0.11 0.18 100.0 SNORD71-201 snoRNA OCI-LY7 (Cell line)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 13941.00 89.40 144.44 98.26 SNORD71-201 snoRNA OCI-LY7 (Cell line)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 821.00 5.26 8.51 100.0 SNORD71-201 snoRNA OCI-LY7 (Cell line)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 484.00 76.95 5.01 96.22 MIR194-2HG-201 lncRNA OCI-LY7 (Cell line)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 126.00 20.03 1.31 71.19 MIR194-2HG-201 lncRNA OCI-LY7 (Cell line)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 24.00 1.61 0.25 100.0 LINC01783-201 lncRNA OCI-LY7 (Cell line)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 1.00 12.50 0.01 100.0 RPS7P15-201 processed pseudogene OCI-LY7 (Cell line)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 160.00 1.49 1.66 100.0 SNORD62B-201 snoRNA OCI-LY7 (Cell line)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 182.00 1.69 1.89 100.0 SNORD62B-201 snoRNA OCI-LY7 (Cell line)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 58.00 0.54 0.60 100.0 SNORD62B-201 snoRNA OCI-LY7 (Cell line)