ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 42.00 65.62 0.44 100.0 KRTAP19-1-201 protein coding OCI-LY7 (Cell line)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4.00 80.00 0.04 100.0 MIR301B-201 miRNA OCI-LY7 (Cell line)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 539.00 73.04 5.58 93.9 RNU1-82P-201 snRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 104.00 7.81 1.08 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 182.00 13.66 1.89 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 257.00 19.29 2.66 77.18 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 65.00 4.88 0.67 100.0 SNORD66-201 snoRNA OCI-LY7 (Cell line)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1.00 2.70 0.01 100.0 U3.17-201 snoRNA OCI-LY7 (Cell line)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1412.00 62.81 14.63 100.0 SNORD17-201 snoRNA OCI-LY7 (Cell line)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 653.00 48.26 6.77 100.0 SNORD72-201 snoRNA OCI-LY7 (Cell line)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 400.00 66.23 4.14 100.0 SNORD70B-201 snoRNA OCI-LY7 (Cell line)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1304.00 6.36 13.51 93.08 RNY4P18-201 misc RNA OCI-LY7 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 2658.00 26.40 27.54 100.0 SNORD90-201 snoRNA OCI-LY7 (Cell line)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 6208.00 61.67 64.32 86.8 SNORD90-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 105.00 0.58 1.09 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 16367.00 90.70 169.58 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 251.00 1.39 2.60 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 174.00 0.96 1.80 100.0 SNORD69-201 snoRNA OCI-LY7 (Cell line)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1120.00 65.38 11.60 92.03 SNORD70-201 snoRNA OCI-LY7 (Cell line)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 239.00 5.41 2.48 100.0 B4GALNT2-202 protein coding OCI-LY7 (Cell line)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 2600.00 58.89 26.94 71.51 B4GALNT2-202 protein coding OCI-LY7 (Cell line)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 75.00 77.32 0.78 100.0 NDE1-202 protein coding OCI-LY7 (Cell line)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5041.00 80.23 52.23 100.0 SNORD111-201 snoRNA OCI-LY7 (Cell line)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2181.00 43.34 22.60 73.96 SNORD88A-201 snoRNA OCI-LY7 (Cell line)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 5.00 100.00 0.05 100.0 MIR548K-201 miRNA OCI-LY7 (Cell line)