ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 1881.00 83.75 2.21 100.0 Y_RNA.389-201 misc RNA smooth muscle cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 182.00 0.14 0.21 100.0 SNORD101-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 4411.00 3.40 5.18 87.36 SNORD101-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 119031.00 91.88 139.74 99.0 SNORD101-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 164.00 0.13 0.19 100.0 SNORD101-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 290559.00 97.66 341.12 100.0 SNORD37-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 175135.00 89.03 205.61 97.68 SNORD59A-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 2032.00 63.11 2.39 100.0 SNORA7B-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 3021.00 81.10 3.55 100.0 SNORD14D-201 snoRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 216.00 14.17 0.25 100.0 Y_RNA.555-201 misc RNA smooth muscle cell (In vitro differentiated cells)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 2615.00 83.36 3.07 86.22 MIR25-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 17477.00 92.99 20.52 98.4 MIR99B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 969.00 35.81 1.14 73.3 MIR23B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 1535.00 56.73 1.80 86.53 MIR23B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 6241.00 89.35 7.33 100.0 MIR203A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 35092.00 76.76 41.20 88.51 MIR199B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 4798.00 10.50 5.63 100.0 MIR199B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 458.00 95.02 0.54 100.0 MIR30B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 624.00 74.11 0.73 100.0 MIR181D-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 45.00 93.75 0.05 100.0 MIR508-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 34.00 97.14 0.04 100.0 MIR215-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 2035.00 0.35 2.39 100.0 MIR181A2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 66271.00 99.11 77.80 99.64 MIR191-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 124.00 68.51 0.15 81.05 MIR149-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 236.00 16.26 0.28 100.0 MIR181C-201 miRNA smooth muscle cell (In vitro differentiated cells)