Precursor detail

ENST00000389680.2

Linked gene MT-RNR1 • Homo Sapiens

2 sncRNAs

Precursor snapshot

Transcript name
MT-RNR1-201
Transcript ID
ENST00000389680.2
Precursor type
Mt rRNA
Chromosome
chrM
Genomic start
648
Genomic end
1601
Strand
+

Precursor Annotation

Gene and transcript context

Gene context

Gene name
MT-RNR1
Gene ID
ENSG00000211459.2
Gene type
Mt_rRNA

Transcript metrics

Total sncRNAs
2
Transcript length
954

Expression table for sncRNAs derived from this precursor

Showing 1–2 of 2 results |
Columns to display
sncRNA Name Position in precursor Expression (sum) Expression fraction Expression (CPM sum) Prominence Biosamples
ENST00000389680.2_316_354_+ 316–354 313723.00 16.59 7.99 100.0
GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) spleen (Tissue) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) body of pancreas (Tissue) stomach (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) sigmoid colon (Tissue) tibial nerve (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000389680.2_2_90_+ 2–90 48473.00 2.56 1.23 100.0
thoracic aorta endothelial cell (Primary cell) melanocyte of skin (Primary cell) skeletal muscle satellite cell (Primary cell) GM12878 (Cell line) parietal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) temporal lobe (Tissue) uterus (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) diencephalon (Tissue) metanephros (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) body of pancreas (Tissue) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) OCI-LY7 (Cell line) HT-29 (Cell line) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)