Precursor detail

ENST00000362698.1

Linked gene RNU5A-1 Homo Sapiens

15 sncRNAs

Precursor snapshot

Transcript name
RNU5A-1-201
Transcript ID
ENST00000362698.1
Precursor type
snRNA
Chromosome
chr15
Genomic start
65296051
Genomic end
65296166
Strand
+

Precursor Annotation

Gene and transcript context

Gene context

Gene name
RNU5A-1
Gene ID
ENSG00000199568.1
Gene type
snRNA

Transcript metrics

Total sncRNAs
15
Transcript length
116

Expression table for sncRNAs derived from this precursor

Showing 1–15 of 15 results |
sncRNA Name Position in precursor Expression (sum) Expression fraction Expression (CPM sum) Prominence Biosamples
ENST00000362698.1_72_116_+ 72–116 80571.00 1.69 2.04 100.0
ENST00000362698.1_68_116_+ 68–116 497827.81 10.44 12.61 74.92
ENST00000362698.1_66_116_+ 66–116 298262.19 6.26 7.55 50.44
ENST00000362698.1_63_116_+ 63–116 260132.00 5.46 6.59 50.55
ENST00000362698.1_60_116_+ 60–116 563817.00 11.83 14.28 72.23
ENST00000362698.1_55_116_+ 55–116 228599.00 4.80 5.79 61.68
ENST00000362698.1_52_116_+ 52–116 240929.00 5.05 6.10 61.49
ENST00000362698.1_47_116_+ 47–116 338574.00 7.10 8.57 72.92
ENST00000362698.1_40_116_+ 40–116 60406.00 1.27 1.53 100.0
ENST00000362698.1_36_116_+ 36–116 187262.00 3.93 4.74 71.77
ENST00000362698.1_34_116_+ 34–116 113549.00 2.38 2.87 46.4
ENST00000362698.1_29_116_+ 29–116 317701.00 6.66 8.06 79.19
hematopoietic multipotent progenitor cell (In vitro differentiated cells) neural cell (In vitro differentiated cells) fibroblast of the aortic adventitia (Primary cell) thoracic aorta endothelial cell (Primary cell) articular chondrocyte of knee joint (Primary cell) hair follicle dermal papilla cell (Primary cell) mesenchymal stem cell of adipose (Primary cell) mammary epithelial cell (Primary cell) mesenchymal stem cell of Wharton's jelly (Primary cell) osteoblast (Primary cell) mesenchymal stem cell of the bone marrow (Primary cell) placental pericyte (Primary cell) placental epithelial cell (Primary cell) vein endothelial cell (Primary cell) fibroblast of villous mesenchyme (Primary cell) subcutaneous preadipocyte (Primary cell) IMR-90 (Cell line) fibroblast of dermis (Primary cell) melanocyte of skin (Primary cell) skeletal muscle satellite cell (Primary cell) SK-N-SH (Cell line) GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) body of pancreas (Tissue) OCI-LY7 (Cell line) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000362698.1_24_116_+ 24–116 75224.72 1.58 1.92 45.58
hematopoietic multipotent progenitor cell (In vitro differentiated cells) neural cell (In vitro differentiated cells) fibroblast of the aortic adventitia (Primary cell) thoracic aorta endothelial cell (Primary cell) articular chondrocyte of knee joint (Primary cell) hair follicle dermal papilla cell (Primary cell) mesenchymal stem cell of adipose (Primary cell) mammary epithelial cell (Primary cell) mesenchymal stem cell of Wharton's jelly (Primary cell) osteoblast (Primary cell) mesenchymal stem cell of the bone marrow (Primary cell) placental pericyte (Primary cell) placental epithelial cell (Primary cell) vein endothelial cell (Primary cell) fibroblast of villous mesenchyme (Primary cell) subcutaneous preadipocyte (Primary cell) IMR-90 (Cell line) fibroblast of dermis (Primary cell) melanocyte of skin (Primary cell) skeletal muscle satellite cell (Primary cell) SK-N-SH (Cell line) GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) body of pancreas (Tissue) OCI-LY7 (Cell line) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000362698.1_22_116_+ 22–116 93572.28 1.96 2.38 67.06
hematopoietic multipotent progenitor cell (In vitro differentiated cells) neural cell (In vitro differentiated cells) fibroblast of the aortic adventitia (Primary cell) thoracic aorta endothelial cell (Primary cell) articular chondrocyte of knee joint (Primary cell) hair follicle dermal papilla cell (Primary cell) mesenchymal stem cell of adipose (Primary cell) mammary epithelial cell (Primary cell) mesenchymal stem cell of Wharton's jelly (Primary cell) osteoblast (Primary cell) mesenchymal stem cell of the bone marrow (Primary cell) placental pericyte (Primary cell) placental epithelial cell (Primary cell) vein endothelial cell (Primary cell) fibroblast of villous mesenchyme (Primary cell) subcutaneous preadipocyte (Primary cell) IMR-90 (Cell line) fibroblast of dermis (Primary cell) melanocyte of skin (Primary cell) skeletal muscle satellite cell (Primary cell) SK-N-SH (Cell line) GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) body of pancreas (Tissue) OCI-LY7 (Cell line) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000362698.1_1_78_+ 1–78 58684.00 1.23 1.49 100.0