Precursor detail

ENST00000527983.5

Linked gene HSPA8 • Homo Sapiens

2 sncRNAs

Precursor snapshot

Transcript name
HSPA8-211
Transcript ID
ENST00000527983.5
Precursor type
retained intron
Chromosome
chr11
Genomic start
123059233
Genomic end
123062207
Strand
Not available

Precursor Annotation

Gene and transcript context

Gene context

Gene name
HSPA8
Gene ID
ENSG00000109971.14
Gene type
protein_coding

Transcript metrics

Total sncRNAs
2
Transcript length
2975

Expression table for sncRNAs derived from this precursor

Showing 1–2 of 2 results |
Columns to display
sncRNA Name Position in precursor Expression (sum) Expression fraction Expression (CPM sum) Prominence Biosamples
ENST00000527983.5_1320_1408_+ 1320–1408 1017216.00 69.41 25.84 100.0
thoracic aorta endothelial cell (Primary cell) osteoblast (Primary cell) mesenchymal stem cell of the bone marrow (Primary cell) fibroblast of dermis (Primary cell) melanocyte of skin (Primary cell) GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) body of pancreas (Tissue) OCI-LY7 (Cell line) trophoblast cell (In vitro differentiated cells) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000527983.5_1314_1406_+ 1314–1406 119774.00 8.17 3.08 66.64
hematopoietic multipotent progenitor cell (In vitro differentiated cells) neural cell (In vitro differentiated cells) fibroblast of the aortic adventitia (Primary cell) thoracic aorta endothelial cell (Primary cell) articular chondrocyte of knee joint (Primary cell) hair follicle dermal papilla cell (Primary cell) mesenchymal stem cell of adipose (Primary cell) mammary epithelial cell (Primary cell) mesenchymal stem cell of Wharton's jelly (Primary cell) osteoblast (Primary cell) mesenchymal stem cell of the bone marrow (Primary cell) placental pericyte (Primary cell) placental epithelial cell (Primary cell) vein endothelial cell (Primary cell) fibroblast of villous mesenchyme (Primary cell) subcutaneous preadipocyte (Primary cell) IMR-90 (Cell line) fibroblast of dermis (Primary cell) melanocyte of skin (Primary cell) skeletal muscle satellite cell (Primary cell) SK-N-SH (Cell line)