ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 149.00 78.84 0.73 100.0 MIR15B-201 miRNA stomach (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 933.00 80.43 4.55 100.0 MIR150-201 miRNA stomach (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 18.00 46.15 0.09 100.0 MIR542-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 314.00 71.69 1.53 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 27.00 6.16 0.13 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 12586.00 11.42 61.32 77.89 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 8125.00 7.37 39.59 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 512.00 0.46 2.49 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 83938.00 76.19 408.97 95.92 MIR30A-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 89270.00 91.43 434.95 94.84 MIR27B-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 986.00 1.01 4.80 100.0 MIR27B-201 miRNA stomach (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 6.00 100.00 0.03 100.0 MIR196A2-201 miRNA stomach (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 62.00 78.48 0.30 100.0 MIR577-201 miRNA stomach (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 229.00 68.98 1.12 78.69 MIR654-201 miRNA stomach (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 580.00 92.06 2.83 98.31 MIR204-201 miRNA stomach (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1703.00 93.26 8.30 100.0 MIR152-201 miRNA stomach (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 4.00 40.00 0.02 100.0 MIR138-1-201 miRNA stomach (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 4791.00 92.92 23.34 100.0 MIR30C1-201 miRNA stomach (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 121.00 79.61 0.59 100.0 MIR660-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 724.00 6.89 3.53 100.0 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 7302.00 69.45 35.58 80.82 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 48.00 27.43 0.23 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 95.00 54.29 0.46 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 13894.38 26.05 67.70 30.37 MIR182-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 28923.05 54.24 140.92 58.68 MIR182-201 miRNA stomach (Tissue)