ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 224.00 5.50 1.09 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 4280.00 0.32 20.85 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 925908.00 68.42 4511.33 91.34 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 7267.00 63.52 35.41 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 17.00 0.75 0.08 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 546.00 0.99 2.66 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 86.00 0.25 0.42 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 187.00 0.55 0.91 44.95 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 148.00 0.43 0.72 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 452.00 1.32 2.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 575.00 1.68 2.80 83.33 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 131.00 0.38 0.64 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 5002.00 30.64 24.37 50.56 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2782.00 17.04 13.55 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1621.00 10.72 7.90 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 125.00 0.18 0.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 74.00 0.11 0.36 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 64.00 0.09 0.31 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 107.00 0.16 0.52 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 62546.00 91.50 304.74 96.99 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1119.00 7.75 5.45 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 22905.00 70.15 111.60 88.24 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 269.00 2.08 1.31 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1907.00 33.69 9.29 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1066.00 18.83 5.19 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA stomach (Tissue)