ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 442.00 1.44 2.15 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 569.52 1.86 2.77 41.03 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 577.59 1.88 2.81 42.82 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 899.15 2.93 4.38 42.19 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5913.00 19.30 28.81 80.53 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 198.00 0.65 0.96 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 792.00 84.53 3.86 87.22 MIR155HG-205 lncRNA stomach (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 130.00 74.29 0.63 100.0 ENST00000784740 lncRNA stomach (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 63.00 1.07 0.31 100.0 ENST00000785178 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 207.00 5.43 1.01 35.51 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 757.00 19.84 3.69 100.0 ENST00000786284 lncRNA stomach (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 376.00 9.86 1.83 69.12 ENST00000786284 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1280.79 6.21 6.24 47.38 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1211.61 5.88 5.90 44.82 ENST00000797550 lncRNA stomach (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 9457.00 45.86 46.08 65.92 ENST00000797550 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 64584.00 84.70 314.67 91.7 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 94.00 0.12 0.46 100.0 MIR181A1HG-212 lncRNA stomach (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 39.00 60.94 0.19 100.0 C19orf48P-218 lncRNA stomach (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 3957.00 70.55 19.28 90.4 SNHG18-220 lncRNA stomach (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 205.00 21.53 1.00 100.0 ENST00000817026 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 26.00 0.51 0.13 100.0 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 413.33 8.19 2.01 34.39 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 127.43 2.52 0.62 47.2 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1010.45 20.01 4.92 62.76 ENST00000823279 lncRNA stomach (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 316.92 6.28 1.54 26.04 ENST00000823279 lncRNA stomach (Tissue)