ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 15440.00 62.84 75.23 89.88 MIR30D-201 miRNA stomach (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 6418.00 26.12 31.27 78.69 MIR30D-201 miRNA stomach (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 4751.00 57.03 23.15 100.0 MIR126-201 miRNA stomach (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 3342.00 40.12 16.28 96.73 MIR126-201 miRNA stomach (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 38.00 33.63 0.19 100.0 MIR374A-201 miRNA stomach (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 879.00 84.11 4.28 100.0 MIR31-201 miRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 984.00 0.46 4.79 64.61 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 8.00 0.00 0.04 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 4.00 0.00 0.02 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 69.00 0.03 0.34 65.09 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 165.00 0.08 0.80 97.63 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 422.24 0.20 2.06 53.86 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1463.00 0.69 7.13 57.06 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 26.00 0.01 0.13 78.79 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 22.00 0.01 0.11 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 5409.00 2.55 26.35 83.09 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 300.01 0.14 1.46 54.25 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 196.00 16.39 0.95 100.0 Y_RNA.14-201 misc RNA stomach (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 5.00 1.85 0.02 100.0 RNU5E-1-201 snRNA stomach (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 1319.00 29.67 6.43 100.0 SNORA31-201 snoRNA stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 9.00 0.65 0.04 19.57 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 20.00 1.44 0.10 51.28 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 88.00 6.33 0.43 100.0 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 610.57 2.25 2.97 69.15 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 5783.00 21.30 28.18 73.17 RNU5A-1-201 snRNA stomach (Tissue)