ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 503.00 0.62 2.18 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2001.00 13.62 8.69 97.23 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 78.00 0.53 0.34 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 5532.00 37.65 24.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 7715.00 37.46 33.49 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 565.00 0.14 2.45 90.54 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 561.00 0.14 2.44 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 613.00 0.15 2.66 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 163.00 0.04 0.71 75.12 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 85414.00 21.36 370.77 48.53 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 78.00 0.02 0.34 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 60.00 0.02 0.26 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 38.00 21.11 0.16 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 439.00 0.32 1.91 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 29.00 0.70 0.13 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 506.00 12.26 2.20 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 139.00 2.92 0.60 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 120.00 0.56 0.52 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 238.00 0.17 1.03 21.88 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 421.00 0.31 1.83 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1183.00 8.51 5.14 65.04 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 935.00 6.73 4.06 44.15 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 269.00 1.33 1.17 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 253692.00 63.53 1101.23 93.65 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3034.00 0.76 13.17 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA body of pancreas (Tissue)