ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 2465.00 0.12 10.70 100.0 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1663968.19 79.27 7222.96 82.31 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 345691.02 16.47 1500.58 16.69 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 8175.00 0.39 35.49 93.52 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 273.00 0.01 1.19 100.0 C19orf48P-203 retained intron body of pancreas (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 961.00 38.72 4.17 100.0 RPS11-206 retained intron body of pancreas (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1280.00 51.57 5.56 100.0 RPS11-206 retained intron body of pancreas (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 778150.00 80.51 3377.80 81.71 CARMN-209 lncRNA body of pancreas (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 791.00 39.57 3.43 100.0 ENST00000602478 lncRNA body of pancreas (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3573.00 56.79 15.51 100.0 PPFIA1P1-201 processed pseudogene body of pancreas (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 2005.00 33.48 8.70 100.0 SNORD114-21-201 snoRNA body of pancreas (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 2201.00 36.76 9.55 100.0 SNORD114-21-201 snoRNA body of pancreas (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 2644.00 94.50 11.48 100.0 MIR98-201 miRNA body of pancreas (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 4688.00 89.93 20.35 100.0 SNORD113-5-201 snoRNA body of pancreas (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 133.00 68.91 0.58 100.0 MIR15A-201 miRNA body of pancreas (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 359.00 30.97 1.56 100.0 SNHG21-206 retained intron body of pancreas (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 1480.00 82.31 6.42 100.0 SNORD11B-201 snoRNA body of pancreas (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1973.00 23.23 8.56 100.0 SNORD91B-201 snoRNA body of pancreas (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 8214.00 22.38 35.66 28.19 SNORD91A-201 snoRNA body of pancreas (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 21533.00 45.10 93.47 94.1 MIR486-1-201 miRNA body of pancreas (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 18918.00 55.84 82.12 82.45 NOP56-219 retained intron body of pancreas (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 469.00 1.38 2.04 100.0 NOP56-219 retained intron body of pancreas (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 3530.00 10.42 15.32 100.0 NOP56-219 retained intron body of pancreas (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 2142.00 6.32 9.30 62.96 NOP56-219 retained intron body of pancreas (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 160.00 0.60 0.69 61.78 RNA5-8SN2-201 rRNA body of pancreas (Tissue)