ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 4609.00 65.71 20.01 80.27 MIR125B1-201 miRNA body of pancreas (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 21.00 8.05 0.09 100.0 MIR493-201 miRNA body of pancreas (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 240.00 91.95 1.04 100.0 MIR493-201 miRNA body of pancreas (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 160828.35 35.48 698.12 37.69 MIR182-201 miRNA body of pancreas (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 243520.11 53.72 1057.07 61.06 MIR182-201 miRNA body of pancreas (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 4559.00 84.96 19.79 90.03 MIR100-201 miRNA body of pancreas (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 100.00 100.00 0.43 100.0 MIR301A-201 miRNA body of pancreas (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 4146.00 89.45 18.00 97.92 MIR130A-201 miRNA body of pancreas (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 447.00 9.64 1.94 64.41 MIR130A-201 miRNA body of pancreas (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 142117.00 97.98 616.90 99.02 MIRLET7F2-201 miRNA body of pancreas (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 279.00 81.82 1.21 100.0 MIR652-201 miRNA body of pancreas (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1090.00 69.69 4.73 100.0 MIR140-201 miRNA body of pancreas (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 250.00 32.09 1.09 41.12 MIR106B-201 miRNA body of pancreas (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 131743.00 60.87 571.87 97.23 SNORD83A-201 snoRNA body of pancreas (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 78478.00 36.26 340.66 95.07 SNORD83A-201 snoRNA body of pancreas (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 391.00 54.92 1.70 100.0 SNORD41-201 snoRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1644.00 14.58 7.14 69.9 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 1722.00 15.27 7.47 44.87 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 61.00 0.54 0.26 100.0 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 829.00 37.06 3.60 100.0 MT-TV-201 Mt tRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 562.00 7.30 2.44 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 46.00 0.60 0.20 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 617.00 8.01 2.68 89.42 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 62.00 0.81 0.27 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 642.00 8.34 2.79 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)