ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 5701.00 98.60 25.74 100.0 HPS4-237 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 4.00 57.14 0.02 100.0 MEG8-253 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 1.00 10.00 0.00 100.0 MEG9-206 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 3.00 30.00 0.01 100.0 MEG9-206 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 5828.00 12.67 26.31 100.0 DNAJC5-203 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 333.00 4.84 1.50 100.0 ENST00000707189 TEC mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 605.00 0.26 2.73 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 1.00 0.00 0.00 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 153447.96 65.03 692.72 71.81 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1630.00 0.69 7.36 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 65888.86 27.92 297.45 30.63 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 4882.00 2.07 22.04 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 49.00 0.02 0.22 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 2648.00 1.12 11.95 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 3780.00 1.60 17.06 100.0 MIR17HG-214 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 25519.00 48.58 115.20 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 5155.00 9.81 23.27 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 69.00 0.13 0.31 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 64.00 0.12 0.29 83.12 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 17747.00 33.79 80.12 100.0 SNHG32-223 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 10002.00 61.74 45.15 100.0 SNHG32-227 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 2359.00 14.56 10.65 98.99 SNHG32-227 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 31.00 0.19 0.14 100.0 SNHG32-227 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 853.00 5.27 3.85 100.0 SNHG32-227 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 204.00 74.18 0.92 100.0 B4GALT1-203 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)