ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 41.76 0.05 0.19 58.0 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 20.00 0.02 0.09 100.0 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 862.00 0.99 3.89 70.37 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 8.00 0.01 0.04 100.0 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 114.00 0.13 0.51 100.0 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 12.00 0.01 0.05 100.0 SNHG1-248 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 157.00 7.56 0.71 100.0 SNHG14-315 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 80.00 3.85 0.36 91.95 SNHG14-315 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 125.00 6.02 0.56 89.29 SNHG14-315 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1548.00 8.17 6.99 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 765.01 4.04 3.45 27.39 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 3.00 0.02 0.01 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 200.00 1.06 0.90 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 2449.65 12.93 11.06 77.64 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 68.00 0.36 0.31 56.2 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 38.00 0.20 0.17 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 8235.00 43.45 37.18 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 1.00 0.01 0.00 100.0 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 227.00 1.20 1.02 95.78 SNHG5-273 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 4.00 0.38 0.02 100.0 SNHG14-323 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1.00 3.45 0.00 100.0 MEG8-251 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 49.00 19.07 0.22 94.23 SNHG14-336 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 16.00 6.23 0.07 29.09 SNHG14-336 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 17.00 2.29 0.08 100.0 SNHG14-341 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 223.00 22.46 1.01 100.0 FMN2-209 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)