ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 68.00 0.01 0.31 100.0 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 875582.00 72.93 3952.68 76.29 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 1920.00 19.07 8.67 100.0 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 3768.05 37.42 17.01 90.32 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 1197.81 11.90 5.41 27.05 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 22.00 0.22 0.10 70.97 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 845.00 8.39 3.81 100.0 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 5.00 83.33 0.02 100.0 ENST00000597420 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 19.00 11.88 0.09 100.0 RPS11-206 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 2365328.00 83.39 10677.92 84.27 CARMN-209 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 14.00 29.17 0.06 100.0 PPFIA1P1-201 processed pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1.00 33.33 0.00 100.0 SNORD114-21-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 8579.00 98.79 38.73 100.0 MIR98-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 3870.00 95.74 17.47 100.0 MIR15A-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1666.00 60.38 7.52 100.0 SNHG21-206 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 32.00 9.14 0.14 100.0 SNORD91B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 139.00 11.15 0.63 92.05 SNORD91A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 1799.00 48.23 8.12 98.52 MIR486-1-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 29.00 0.34 0.13 33.72 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 335.00 3.95 1.51 100.0 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 5685.00 67.03 25.66 100.0 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 257.00 3.03 1.16 97.72 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 136.00 0.26 0.61 60.18 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 8333.44 15.72 37.62 53.09 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 1692.00 3.19 7.64 100.0 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)