ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 2167.00 21.38 9.78 85.05 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 30.00 0.41 0.14 28.57 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 43.00 0.58 0.19 7.69 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 20.00 0.27 0.09 100.0 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 3646.00 49.26 16.46 99.35 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 607.00 8.20 2.74 98.06 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 2.00 50.00 0.01 100.0 ENST00000582320 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 1.00 25.00 0.00 100.0 ENST00000582320 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 51.00 1.46 0.23 100.0 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 965.63 27.63 4.36 49.62 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 1102.13 31.53 4.98 54.4 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 108355.00 89.40 489.15 99.95 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 2862.00 2.36 12.92 100.0 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 1445.00 1.19 6.52 100.0 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1462.00 87.18 6.60 100.0 MIR151B-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 5.00 0.05 0.02 100.0 SNORD3A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 55.00 6.43 0.25 100.0 SNORD92-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 20865.00 63.67 94.19 100.0 NSRP1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 8172.00 24.94 36.89 85.9 NSRP1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 37211.00 53.84 167.98 97.37 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 11895.00 17.21 53.70 86.06 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 8555.00 12.38 38.62 86.01 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 3283.00 4.75 14.82 57.28 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 21.00 29.17 0.09 100.0 ODAD3-204 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 26097.00 2.17 117.81 100.0 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)